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Table 1 2 × 2 contingency table obtained by classifying genes into 2 categorical variables. The letters denote the number of genes for a given category (e.g., “a” denotes the number of retained genes annotated with the tested GO category)

From: The Aquilegia genome reveals a hybrid origin of core eudicots

 

GO

Not-GO

SUM

Retained

a

b

a + b*

Not-retained

c

d

c + d

Sum

a + c

b + d

N = total number of genes

   

=29,550 (across 7 chromosomes)

  1. *equal to 1302 and 6972 for candidate WGD-derived paralogs and tandem gene duplicates, respectively