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Table 1 Independent breast cancer risk signals with ≤ 2 candidate protein-coding genes

From: Chromatin interactome mapping at 139 independent breast cancer risk signals

CytobandLocusSignalTarget gene/sCytobandLocusSignalTarget gene/s
1p22.3chr1:87656923_886569232LMO48q24.21chr8:127424659_1300419313MYC
1q32.1chr1:200937832_2019378321IPO99q31.2chr9:109803808_1113953531KLF4
2p23.3chr2:28670676_296706761ALK,SPDYA9q33.1chr9:118813486_1198134861PAPPA
2p24.1chr2:18815791_198208031OSR110p14chr10:8588113_95881131GATA3
2q35chr2:217405832_2187965081IGFBP510q25.2chr10:114273927_1152861541TCF7L2
2q35chr2:217405832_2187965083IGFBP510q26.12chr10:122593901_1238493242FGFR2
3p24.1chr3:26827965_282852472AZI2,CMC111p15.5chr11:1398664_24425751LSP1
3q23chr3:140612859_1416128591ZBTB3811q13.3chr11:68831418_698791611MYEOV
4p14chr4:38312876_393128761TBC1D1,TLR1011q13.3chr11:68831418_698791612MYEOV
4q24chr4:105569013_1068567611GSTCD,PPA211q13.3chr11:68831418_698791613MYEOV
5p13.3chr5:32067732_330677321ZFR11q24.3chr11:128952507_1299611711BARX2
5p15.33chr5:779790_17974881SLC6A1812p11.22chr12:27639846_290344151CCDC91
5p15.33chr5:779790_17974882SLC6A1812p13.1chr12:13913931_149139311ATF7IP
5q11.1chr5:49141645_506950932CTD-2203A3.1,ISL112q22chr12:95527759_965277591NTN4,RP11-536G4.1
5q11.2chr5:55531884_565878831MAP3K112q24.21chr12:115336522_1163365221TBX3
5q11.2chr5:55531884_565878834MAP3K112q24.21chr12:115336522_1163365222TBX3
5q11.2chr5:55531884_565878835MAP3K112q24.21chr12:115336522_1163365223TBX3
5q11.2chr5:57684061_588655691GAPT13q13.1chr13:32468810_334726261FRY
5q11.2chr5:57684061_588655692PDE4D13q22.1chr13:73464519_744645191KLF5
5q33.3chr5:157730013_1587440831EBF114q13.3chr14:36632769_376357521SLC25A21,SLC25A21-AS1
6p22.3chr6:15899557_168995571ATXN114q24.1chr14:68117194_695346821ZFP36L1
6q14.1chr6:81628386_827959511AL359693.114q24.1chr14:68117194_695346822ZFP36L1
6q23.1chr6:129849119_1308491191AKAP7,TMEM24416q12.2chr16:53300954_543552912IRX5,LPCAT2
6q25chr6:151418856_1529370162ESR116q23.2chr16:80148327_811508051CDYL2
6q25chr6:151418856_1529370163SYNE118q11.2chr18:23832476_250753961KCTD1
6q25chr6:151418856_1529370165ESR119q12chr19:29777729_307777291CCNE1
6q25.1chr6:149086328_1500863281TAB219q13.31chr19:43783447_447865131KCNN4
7q22.1chr7:101054599_1020545991COL26A120p12.3chr20:5448227_64482271GPCPD1
7q34chr7:139442304_1404423041SLC37A321q21.1chr21:16073983_170739831HSPA13,NRIP1
8p12chr8:29009616_300096161DUSP421q21.1chr21:16073983_170739832HSPA13,NRIP1
8q21.11chr8:75730301_769179372CRISPLD122q13.31chr22:45783297_467832971ATXN10
8q23.3chr8:116709548_1177095481TRPS122q13.31chr22:45783297_467832972ATXN10,WNT7B
8q24.21chr8:127424659_1300419312FAM84B,MYC