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Fig. 3 | Genome Biology

Fig. 3

From: Non-coding RNAs underlie genetic predisposition to breast cancer

Fig. 3

mencRNAs with eVariants in an exon. a Regional XLOC-142280 eQTL association plot. Red dots indicate CCVs within the region. b WashU genome browser showing annotated GENCODE genes (blue) and mencRNAs (black) within the 2q31.1 risk region. The XLOC-142280 mencRNA is highlighted in red. CCVs are shown as red colored vertical lines. The dashed gray outline highlights the XLOC-142280 mencRNA. c Zoomed in view of CCVs and XLOC-142280. d Box plot showing the expression of XLOC-142280 in ER-negative versus ER-positive breast tumor samples from TCGA RNA-seq data

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