Fig. 3From: Systematic comparative analysis of single-nucleotide variant detection methods from single-cell RNA sequencing dataThe performance measurements of variant-calling tools in different genomic contexts of simulated data. a Boxplots showing the TPRs with minimal read depths ≥ 3 at inserted SNV loci in different genomic contexts. b Scatter plots showing the log-transformed FDRs with minimal read depths ≥ 3 at inserted SNV loci. The black lines represent the log-transformed median values of FDRs. c Scatter plots showing the precision and recall in different minimal read depth thresholds for high-identity regions. d Boxplots showing the F-scores with minimal read depths ≥ 3 at inserted SNV loci in different genomic contextsBack to article page