TY - JOUR AU - David, L. A. AU - Materna, A. C. AU - Friedman, J. AU - Campos-Baptista, M. I. AU - Blackburn, M. C. AU - Perrotta, A. PY - 2014 DA - 2014// TI - Host lifestyle affects human microbiota on daily timescales JO - Genome Biol. VL - 15 UR - https://doi.org/10.1186/gb-2014-15-7-r89 DO - 10.1186/gb-2014-15-7-r89 ID - David2014 ER - TY - JOUR AU - Mehta, R. S. AU - Abu-Ali, G. S. AU - Drew, D. A. AU - Lloyd-Price, J. AU - Subramanian, A. AU - Lochhead, P. PY - 2018 DA - 2018// TI - Stability of the human faecal microbiome in a cohort of adult men JO - Nat Microbiol. VL - 3 UR - https://doi.org/10.1038/s41564-017-0096-0 DO - 10.1038/s41564-017-0096-0 ID - Mehta2018 ER - TY - JOUR AU - Johnson, J. R. AU - Clabots, C. AU - Kuskowski, M. A. PY - 2008 DA - 2008// TI - Multiple-host sharing, long-term persistence, and virulence of Escherichia coli clones from human and animal household members JO - J Clin Microbiol. VL - 46 UR - https://doi.org/10.1128/JCM.00980-08 DO - 10.1128/JCM.00980-08 ID - Johnson2008 ER - TY - JOUR AU - Zitomersky, N. L. AU - Coyne, M. J. AU - Comstock, L. E. PY - 2011 DA - 2011// TI - Longitudinal analysis of the prevalence, maintenance, and IgA response to species of the order Bacteroidales in the human gut JO - Infect Immun. VL - 79 UR - https://doi.org/10.1128/IAI.01348-10 DO - 10.1128/IAI.01348-10 ID - Zitomersky2011 ER - TY - STD TI - Martinson JNV, Pinkham NV, Peters GW, Cho H, Heng J, Rauch M, et al. Rethinking gut microbiome residency and the Enterobacteriaceae in healthy human adults. ISME J. 2019. https://doi.org/10.1038/s41396-019-0435-7. ID - ref5 ER - TY - JOUR AU - Lieberman, T. D. AU - Flett, K. B. AU - Yelin, I. AU - Martin, T. R. AU - McAdam, A. J. AU - Priebe, G. P. PY - 2014 DA - 2014// TI - Genetic variation of a bacterial pathogen within individuals with cystic fibrosis provides a record of selective pressures JO - Nat Genet. VL - 46 UR - https://doi.org/10.1038/ng.2848 DO - 10.1038/ng.2848 ID - Lieberman2014 ER - TY - JOUR AU - Barrick, J. E. AU - Yu, D. S. AU - Yoon, S. H. AU - Jeong, H. AU - Oh, T. K. AU - Schneider, D. PY - 2009 DA - 2009// TI - Genome evolution and adaptation in a long-term experiment with Escherichia coli JO - Nature. VL - 461 UR - https://doi.org/10.1038/nature08480 DO - 10.1038/nature08480 ID - Barrick2009 ER - TY - JOUR AU - Zhao, S. AU - Lieberman, T. D. AU - Poyet, M. AU - Kauffman, K. M. AU - Gibbons, S. M. AU - Groussin, M. PY - 2019 DA - 2019// TI - Adaptive evolution within gut microbiomes of healthy people JO - Cell Host Microbe. VL - 25 UR - https://doi.org/10.1016/j.chom.2019.03.007 DO - 10.1016/j.chom.2019.03.007 ID - Zhao2019 ER - TY - JOUR AU - Garud, N. R. AU - Good, B. H. AU - Hallatschek, O. AU - Pollard, K. S. PY - 2019 DA - 2019// TI - Evolutionary dynamics of bacteria in the gut microbiome within and across hosts JO - PLoS Biol. VL - 17 UR - https://doi.org/10.1371/journal.pbio.3000102 DO - 10.1371/journal.pbio.3000102 ID - Garud2019 ER - TY - JOUR AU - Luca, F. AU - Kupfer, S. S. AU - Knights, D. AU - Khoruts, A. AU - Blekhman, R. PY - 2018 DA - 2018// TI - Functional genomics of host–microbiome interactions in humans JO - Trends Genet. VL - 34 UR - https://doi.org/10.1016/j.tig.2017.10.001 DO - 10.1016/j.tig.2017.10.001 ID - Luca2018 ER -