Fig. 4
From: scAlign: a tool for alignment, integration, and rare cell identification from scRNA-seq data
Semi-supervised alignment mode of scAlign enables use of partial sets of cell type labels. UMAP visualization of the HeterogenousBenchmark after alignment with scAlign+ trained with a labels for all cells in both conditions, b after removal of labels for LT-HSC HSC in the stimulated condition, c after removal of labels for LT-HSCs and ST-HSCs in the stimulated condition, and d scAlign trained without cell labels