Fig. 10

Collinear control between differently located RNA segments. a A model was built for the combined control of translation rate (TR) by both the most highly folded window (min) and the non-overlapping second most highly folded window (2^ndmin). The R² coefficients for these combined features vs log₁₀ TR are given (top). The percent of the unique and collinear contributions of “min” and “2^ndmin” to the total variance in translation explained by the model for both features is shown by length on the y-axis. The percent of control of TR by “2^ndmin” that is collinear with control by “min” is shown in red text. The percent of genes in the dataset whose 5′ regions are long enough to contain the two non-overlapping windows used in the analysis are indicated (top). b The collinearity between the most highly folded window (min) and the non-overlapping third most highly folded window (3^ndmin) is displayed as described in a. c The collinearity between regulation of translation by codon frequency in the N-terminal half of each protein (N-codon) and C-terminal half of each protein (C-codon) is shown as described in a, except that the percent of control of TR by “C-codon” that is collinear with control by “N-codon” is shown (red text), and 100% of genes in each dataset were used (top)