Fig. 2
From: Cytoscape Automation: empowering workflow-based network analysis

Relationship between the Cytoscape Desktop (including CyREST, Cytoscape apps and Cytoscape core) and Cytoscape Automation workflows. Dotted lines indicate command/data flows that pre-date Cytoscape Automation. Solid lines indicate flows created for Cytoscape Automation. New components are in green