Fig. 4
From: HUPAN: a pan-genome analysis pipeline for human genomes
PAV profile analysis of 185 deep sequencing Han Chinese genomes. a The number of genes present in an individual using different CDS coverage threshold (80%, 85%, 90%, 95%, and 100%) versus the sequencing depth. b The gene PAV distributed across 185 individuals with the CDS coverage of 0.95. c The number of core genes and the total number of genes in the pan-genome determined with different number of individuals. Each time we randomly increased one individual and calculated the number of core genes and the total number of genes. These processes repeated 100 times. d PAV profile of 606 distributed genes. The red indicated gene presence and the blue indicated gene absence