Fig. 8From: Haplotype-aware diplotyping from noisy long readsGenotyping HMM. Colored states correspond to bipartitions of reads and allele assignments at that position. States in C1 and C2 correspond to bipartitions of reads covering positions 1 and 2 or 2 and 3, respectively. In order to compute genotype likelihoods after running the forward-backward algorithm, states of the same color have to be summed up in each columnBack to article page