Table 3 Number of final whitelisted cellular barcodes output by alevin and Cell Ranger
From: Alevin efficiently estimates accurate gene abundances from dscRNA-seq data
Dataset | Cell Ranger | Alevin | No. of reads |
|---|---|---|---|
Human PBMC 4k | 4346 | 4341 | 379,462,522 |
Human PBMC 8k | 8379 | 8291 | 784,064,148 |
Mouse neurons 900 | 933 | 1291 | 52,805,264 |
Mouse neurons 2k | 2009 | 1881 | 147,010,995 |
Mouse neurons 9k | 9116 | 8519 | 383,366,284 |