Skip to main content

Table 3 Number of final whitelisted cellular barcodes output by alevin and Cell Ranger

From: Alevin efficiently estimates accurate gene abundances from dscRNA-seq data

Dataset Cell Ranger Alevin No. of reads
Human PBMC 4k 4346 4341 379,462,522
Human PBMC 8k 8379 8291 784,064,148
Mouse neurons 900 933 1291 52,805,264
Mouse neurons 2k 2009 1881 147,010,995
Mouse neurons 9k 9116 8519 383,366,284