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Fig. 4 | Genome Biology

Fig. 4

From: Tandem-genotypes: robust detection of tandem repeat expansions from long DNA reads

Fig. 4

Distribution of predicted change in repeat copy number, for PacBio (RSII) reads of cloned SCA10 loci from 3 patients. a tandem-genotypes. Forward (red) and reverse strand reads (blue) are shown separately. b RepeatHMM with straightforward parameters. c RepeatHMM with non-obvious parameters suggested by its authors. y-axis: read count, x-axis: change in copy number relative to the reference human genome. Red arrow: expected repeat copy change, from McFarland et al. [9]

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