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Table 1 Oncopeltus fasciatus genome metrics

From: Molecular evolutionary trends and feeding ecology diversification in the Hemiptera, anchored by the milkweed bug genome

Feature

Value

2n chromosomes

16

Genome size

926 Mb (mean between males and females)

Assembly size

1099 Mb (contigs only, 774 Mb)

Coverage

106.9× raw coverage, 83.7% of reads in final assembly

Contig N50

4047 bp

Scaffold N50

340.0 kb

# scaffolds

17,222

GC content

genome, 32.7%; protein-coding sequence (OGS v1.2), 42%

OGS v1.1 (curated fraction)

19,690 models1 (1426 models, 7.2%)

19,465 genes (1201 genes, 6.2%)

OGS v1.2 (curated fraction)

19,809 models1 (1697 models, 8.7%)

19,616 genes (1518 genes, 7.7%)

  1. 1Individual genes may be represented by multiple models in cases of curated alternative isoforms or if exons of the gene are split across scaffolds
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Genome Biology

ISSN: 1474-760X

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