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Table 2 Analysis results from I-Boost-Permutation for the TCGA KIRC data set

From: I-Boost: an integrative boosting approach for predicting survival time with multiple genomics platforms

Predictor

Estimate

Protein_AR*

− 0.1056

Module_IMMUNE_Bindea_Cell_CD8 T cells_Median_Immunity.2013_PMID.24138885*

− 0.0696

Module_Mature_LuminaUp_Median_Nat.Med.2009_PMID.19648928*

− 0.0676

Module_UNC_MM_Red2_Median_BMC.Med.Genomics.2011_PMID.21214954*

− 0.0671

Module_GP7_Estrogen signaling: r=0.97

− 0.0580

miRNA_hsa-miR-10b-3p*

− 0.0369

Module_UNC_HS_Green1_Median_BMC.Med.Genomics.2011_PMID.21214954

− 0.0369

miRNA_hsa-miR-192-5p

− 0.0291

Protein_Src_pY416*

− 0.0279

miRNA_hsa-miR-425-3p*

− 0.0166

Module_UNC_LUMINAL_Cluster_Median_BMC.Med.Genomics.2011_PMID.21214954

− 0.0159

Module_UNC_HS_Green8_Median_BMC.Med.Genomics.2011_PMID.21214954*

− 0.0129

Protein_PRAS40_pT246*

− 0.0107

Module_UNC_Duke_Module06_er_Median_Mike_PMID:20335537*

− 0.0027

Module_Pcorr_squamoid_PLOS.2012_PMID.22590557

0.0052

Clinical_pathologic_N

0.0060

miRNA_hsa-miR-21-5p

0.0068

Module_UNC_MM_p53null.Basal_Median_Genome.Biol.2013_PMID.24220145*

0.0069

Protein_Caveolin-1

0.0124

miRNA_hsa-miR-21-3p

0.0129

Protein_TIGAR

0.0259

miRNA_hsa-miR-92b-3p*

0.0274

miRNA_hsa-miR-223-3p*

0.0313

miRNA_hsa-miR-130a-3p*

0.0572

miRNA_hsa-miR-222-3p*

0.0583

Protein_IGFBP2*

0.0631

miRNA_hsa-let-7a-3p*

0.0686

Clinical_age

0.1101

Module_UNC_Scorr_Basal_Correlation_JCO.2009_PMID.19204204*

0.1370

Clinical_pathologic_T*

0.2470

  1. Note: See Note of Table 1