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Table 1 Tree error

From: Skmer: assembly-free and alignment-free sample identification using genome skims

Dataset Sequencing effort Mash Skmer AAF (uncorrected) AAF (corrected)
Anopheles 0.1 G 23.19% 1.07% 19.92% 6.36%
  0.5 G 12.84% 0.45% 9.74% 4.9%
  1 G 8.92% 0.37% 9.59% 3.3%
  Mixed 14.75% 0.58% 8.46% 8.45%
Drosophila 0.1 G 23.87% 2.05% 20.29% 5.85%
  0.5 G 13.33% 0.72% 10.37% 5.25%
  1 G 7.11% 0.58% 10.84% 2.2%
  Mixed 16.58% 1.11% 11.36% 10.87%
Birds 0.1 G 37.03% 5.64% 31.81% 21.13%
  0.5 G 25.16% 1.91% 20.8% 6.86%
  1 G 19.42% 1.19% 15.54% 1.05%
  Mixed 28.14% 3.08% 18.15% 7.57%
  1. For each method, we show normalized weighted RF distance (%) of trees inferred from genome-skim distances to trees inferred from full assembly distances. Italics: the lowest error