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Fig. 2 | Genome Biology

Fig. 2

From: SCOPE-Seq: a scalable technology for linking live cell imaging and single-cell RNA sequencing

Fig. 2

a Scatter plot of the number of uniquely aligned human and murine reads for each linked sequencing barcode colored by the relative fluorescence intensity of the human and murine labels before and b after imaging-based multiplet removal. c Principal component analysis of the 19 fluorescence imaging features for the murine cells. d Correlation between the first PC and each imaging feature. e Correlation between the second PC and each imaging feature. f Normalized enrichment scores for MSigDB gene sets enriched in genes that are correlated with the first (purple) and second (magenta) PCs

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