Fig. 3

Correlations of DNA methylation with gene expression. a Networks of KEGG pathways of genes detected in the eQTM mapping. b Genomic location of eQTMs, for positively and negatively associated CpG sites (light and dark yellow, respectively). Odds ratio were computed against the general distribution of the 552,141 CpGs from our dataset. The distribution of eQTMs according to the direction of their effect on gene expression is shown. c Proportions of different groups of CpG sites in all tested sites (left panel) and among the detected eQTMs (right panel)