Skip to main content
Fig. 4 | Genome Biology

Fig. 4

From: VIPER: variability-preserving imputation for accurate gene expression recovery in single-cell RNA sequencing studies

Fig. 4

Heatmaps show the unimputed or imputed gene expression measurements in the scRNAseq data together with the gene expression measurements from bulk RNAseq in the Cell Type data. Expression measurements are shown across cells (for scRNAseq) or across sample replicates (for bulk RNAseq) in seven different cell subpopulations. The seven different cell subpopulations include H1, H9, DEC, EC, HFF, NPC, and TB. Imputed scRNAseq data are obtained from different imputation methods that include DrImpute, MAGIC, SAVER, scImpute, VIPER with elastic net selection, and VIPER with lasso selection

Back to article page

Genome Biology

ISSN: 1474-760X

Contact us