Table 1 Fractions of unclassified (FNR or false-negative rate), percent correctly classified (TPR or true-positive rate), and percent misclassified (FPR or false-positive rate.) simulated reads from ten genomes using Kraken against different versions of bacterial RefSeq
| Â | Â | Â | Genus | Species | ||
|---|---|---|---|---|---|---|
Release | Date | FNR | TPR | FPR | TPR | FPR |
1 | 2003-06-30 | 0.62 | 0.38 | 0.00 | 0.29 | 0.08 |
10 | 2005-03-06 | 0.53 | 0.46 | 0.01 | 0.38 | 0.07 |
20 | 2006-11-05 | 0.49 | 0.49 | 0.01 | 0.40 | 0.08 |
30 | 2008-07-07 | 0.25 | 0.74 | 0.00 | 0.60 | 0.07 |
40 | 2010-05-07 | 0.22 | 0.77 | 0.00 | 0.54 | 0.08 |
50 | 2011-11-08 | 0.21 | 0.78 | 0.01 | 0.52 | 0.07 |
60 | 2013-07-19 | 0.03 | 0.96 | 0.00 | 0.57 | 0.09 |
70 | 2016-03-03 | 0.03 | 0.95 | 0.01 | 0.42 | 0.09 |
80 | 2017-01-09 | 0.03 | 0.94 | 0.01 | 0.28 | 0.08 |