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Table 1 List of genes involved in motility that are altered with quiescence

From: Alternative polyadenylation factors link cell cycle to migration

Type of change (analysis) Genes
Differential expression (DESeq) KISS1, ACTC1, PODXL, RLTPR, PDPN, PALM, MYLIP, DNALI1, ADRA2A, KAL1, LYPD3, TNFRSF12A, ARHGDIB, ACTR3, ACTG1, MSN, PAK4, ARHGDIA, ACTB, TUBB, PTGS2, TPM1, PLAUR, TPM3
Alternative splicing (rMATS) FYN, HGF, CD44, MAP4, ATP2B4, MYLK, ACTN1, SCARB1, FGFR1, FAT1, MYL6, TSPO, AKT2, BRAT1, ARHGAP21, GTPBP4, SOD2, FN1, WIPF1, CD58, KIF17, ITGB1BP1, GLIPR2, CALD1, LRP1, KLC1, KTN1, CHN1, POSTN, NUMB, ENPP2, KIF13A, TPM1, CLTC, MINK1, SH3KBP1, CACNA1C, DAB2, THY1, NCK1, SHC1, NFASC, IL17RC, LAMB2, PTPRM, GAS6, CCDC125, LAMA2, FLNA, SPTAN1, TPM2, CDC42BPB
UTR-type alternative polyadenylation for 2pA site-containing genes MACF1, LMNA, DDR2, LAMC1, NAV1, PEX13, ACTR2, IL1R1, MYO1B, SP100, TRAK1, NCK1, OPA1, PDGFRA, AP3S1, TUBB, PTP4A1, FGFR1OP, ANLN, GLIPR2, AMOTL1, PTPN11, MMP14, FRMD6, SMAD3, DYNLL2, PTPRA, DOK5, COL18A1, SSX2IP, NRAS, CERS2, SDC1, DPP4, DYNC1LI1, MAP4, WNT5A, CD47, DPYSL3, LAMA4, ARHGAP18, CITED2, GNA12, STC1, EXT1, AP3M1, BLOC1S2, RRAS2, TBX5, SYNJ2BP, EMP2, AMFR, STAT3, COL1A1, CCBE1, AP3D1, SDC4, APP, RBFOX2, MYH9, RAP2C
Upstream region-type alternative polyadenylation for 2 pA site-containing genes RDX, PEX14, DYNC2LI1, SUN1, RECK, IQGAP1, DOCK7