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Table 1 Run time comparison using 56 inputs in the run time set

From: SKESA: strategic k-mer extension for scrupulous assemblies

Run time 4 cores, 16 Gb 8 cores, 32 Gb 12 cores, 32 Gb
(seconds) SKESA SPAdes MegaHit SKESA SPAdes MegaHit SKESA SPAdes MegaHit
<=300 6 1 6 16 2 24 32 3 37
301−400 3 0 2 16 1 12 11 3 11
401−500 5 2 8 7 3 7 2 1 5
501−600 6 1 10 6 1 8 3 3 0
601−700 10 1 6 0 3 2 3 3 0
> 700 26 51 24 11 46 3 5 43 3
Median 688 2303 616 359 1319 328 275 1086 240
  1. Best of three wall-clock times is used for each input, method, and resource combination