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Fig. 1 | Genome Biology

Fig. 1

From: Comparative transcriptomic analyses and single-cell RNA sequencing of the freshwater planarian Schmidtea mediterranea identify major cell types and pathway conservation

Fig. 1

Transcriptome generation and characteristics. a Schematic of the tiered approach used for generating the definitive transcriptome. b Length distribution of the transcripts generated by different methods. c Venn diagram showing the results for the mapping of Toronto and PlanMine transcripts onto the recent dd_Smes_g4 genome assembly. d Venn diagram showing the comparison of Toronto, PlanMine, SmedGD, and Oxford transcriptomes, where the transcripts are aligned using BLASTn searches customized for sensitive matches. e Transcriptome completeness for Toronto, PlanMine, SmedGD, and Oxford transcriptomes, estimated via CEGMA and BUSCO core eukaryotic gene sets

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Genome Biology

ISSN: 1474-760X

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