|
Genome
|
Characteristics
|
P. yedoensis var. nudiflora
|
P. avium
|
P. mume
|
P. persica
|
|---|
|
Draft sequences
|
Size (Mb)
|
318.7
|
272.4
|
237.2
|
227.2
|
|
Repetitive sequences
|
No. RNA genesa
|
2187
|
729
|
1541
|
1243
|
|
DNA TE (Mb)
|
47.6
|
26.5
|
25.5
|
38.7
|
|
RNA TE (Mb)
|
79.5
|
56.4
|
49.9
|
62.6
|
|
Simple repeats (Mb)
|
5.9
|
5.3
|
4.2
|
4.1
|
|
Other repeats (Mb)
|
5.6
|
3.9
|
3.3
|
2.7
|
|
Total non-redundant bases (Mb)
|
150.8
|
103.9
|
71.1
|
88.0
|
|
Protein-coding genes
|
Total number
|
41,294
|
43,673
|
31,390
|
27,864
|
|
Avr. gene size (bp)
|
2154
|
2294
|
2514
|
2607
|
|
No. exons per gene
|
4.3
|
3.6
|
4.6
|
5.1
|
|
Avr. exon size (bp)
|
220
|
248
|
249
|
243
|
|
Avr. intron size (bp)
|
362
|
417
|
380
|
317
|
|
Avr. gene density (kb/gene)
|
7.7
|
6.2
|
7.6
|
8.2
|
- Statistics for P. avium, P. mume, and P. persica are based on Shirasawa et al. [8], Zhang et al. [9], and The International Peach Genome Initiative [10], respectively, and repetitive sequences were recalculated using the same criterion used to annotate the P. yedoensis var. nudiflora genome
- aSequences encoding ribosomal RNA, transfer RNA, and microRNA were considered
