From: Single-cell RNAseq for the study of isoforms—how is that possible?
SingleSplice [42]
MISO [41]
BRIE [43]
Expedition [38]
RSEM [73]
Observation level
Gene
Exon
Isoform (full transcript)
Measure of expression
Differentially alternatively spliced (yes/no)
PSI
Read counts per isoform
Single-cell specific
✓
✗
?
Includes interpretation of changes