Gene
|
Populationa
|
Traitb
|
Markerc
|
Minus log(p)d
|
Holm corr. pe
|
---|
HvARM1
|
WHEALBI_LRC
|
PM_ max_2_isol rel_Rol
|
H02
|
2.893
|
0.0051
|
HvARM1
|
WHEALBI_LRC
|
PM_ max_2_isol rel_MRX
|
H02
|
2.848
|
0.0057
|
HvARM1
|
WHEALBI_LRC
|
PM_JKI_75_rel_MRX
|
H02
|
2.418
|
0.0153
|
HvARM1
|
WHEALBI_LRC
|
PM_ max_2_isol rel_Rol
|
S3H_594732776
|
2.893
|
0.0051
|
HvARM1
|
WHEALBI_LRC
|
PM_ max_2_isol rel_MRX
|
S3H_594732776
|
2.848
|
0.0057
|
HvARM1
|
WHEALBI_LRC
|
PM_JKI_75_rel_MRX
|
S3H_594732776
|
2.418
|
0.0153
|
HvARM1
|
WHEALBI_CULT
|
PM_JKI_75_rel_Rol
|
S3H_594731277
|
3.826
|
0.0006
|
HvARM1
|
WHEALBI_CULT
|
PM_JKI_75_rel_MRX
|
S3H_594731277
|
3.460
|
0.0014
|
HvARM1
|
WHEALBI_CULT
|
PM_ max_2_isol rel_MRX
|
S3H_594731277
|
3.374
|
0.0017
|
HvARM1
|
WHEALBI_CULT
|
PM_JKI_75_rel_Rol
|
H01
|
3.826
|
0.0004
|
HvARM1
|
WHEALBI_CULT
|
PM_JKI_75_rel_MRX
|
H01
|
3.460
|
0.0010
|
HvARM1
|
WHEALBI_CULT
|
PM_ max_2_isol rel_MRX
|
H01
|
3.374
|
0.0013
|
HvPUB15
|
WHEALBI_LRC
|
PM_JKI_242_rel_Rol
|
H10
|
0.871
|
0.5379
|
HvPUB15
|
WHEALBI_LRC
|
PM_JKI_242_rel_Rol
|
H11
|
0.684
|
0.6203
|
HvPUB15
|
WHEALBI_LRC
|
PM_ max_2_isol rel_MRX
|
H10
|
0.599
|
1
|
HvPUB15
|
WHEALBI_LRC
|
PM_JKI_242_rel_Rol
|
S3H_689574119
|
0.814
|
1
|
HvPUB15
|
WHEALBI_LRC
|
PM_JKI_242_rel_Rol
|
S3H_689574678
|
0.814
|
1
|
HvPUB15
|
WHEALBI_LRC
|
PM_JKI_242_rel_Rol
|
S3H_689575062
|
0.814
|
1
|
HvPUB15
|
WHEALBI_CULT
|
PM_ max_2_isol rel_Rol
|
S3H_689573944
|
1.055
|
1
|
HvPUB15
|
WHEALBI_CULT
|
PM_JKI_75_rel_Rol
|
S3H_689573944
|
1.002
|
1
|
HvPUB15
|
WHEALBI_CULT
|
PM_JKI_75_rel_MRX
|
S3H_689573776
|
0.925
|
1
|
HvPUB15
|
WHEALBI_CULT
|
PM_JKI_75_rel_MRX
|
H10
|
0.511
|
0.926
|
HvPUB15
|
WHEALBI_CULT
|
PM_ max_2_isol rel_MRX
|
H10
|
0.372
|
1
|
HvPUB15
|
WHEALBI_CULT
|
PM_ max_2_isol rel_Rol
|
H11
|
0.359
|
1
|
- Significantly associated SNP- as well as gene-haplotype polymorphisms are indicated in bold
- aCULT cultivars, LRC landraces
- bThree different powdery mildew (PM) traits were recorded: (1) infection caused by isolate JKI_75 relative to internal reference genotypes Morex (MRX) or Roland (Rol), (2) infection caused by isolate JKI_242 relative to MRX or Rol, (3) maximum infection caused by either isolate relative to MRX or Rol
- cPer population and gene the three most significant haplotype-trait as well as SNP-trait associations are shown; H haplotype, S SNP
- dNegative log(10) of p value for the null hypothesis of a marker-trait association
- eValues > 1 of multiple-testing corrected p values are replaced by 1; number of SNPs or haplotypes per gene = number of tests.