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Table 1 Sequence overview of HvPUB15 and its partial duplicate HvARM1 in the barley genome

From: Evolutionarily conserved partial gene duplication in the Triticeae tribe of grasses confers pathogen resistance

Identifier

HvPUB15

HvARM1

cDNA clone ID

HO23D08

HO14H18

HarvEST assembly #35 unigene Nr.

3072

3071

Full-coding sequence cDNA Acc. Nr.

AK361754

AK371875

Morex WGS contig Acc. Nr.a

CAJW010005672

CAJX010121345

Barke WGS contig Acc. Nr.a

CAJV010187631

CAJV010188692

Bowman WGS contig Acc. Nr.a

CAJX010851782

CAJX010121345

High-confidence barley gene IDa

HORVU3Hr1G113910

HORVU3Hr1G081380

Chromosomeb

3HL

3HL

Position (Mbp)b

689.57

594.73

Syntenic to Brachypodium distachyon, Oryza sativa, Sorghum bicolor

No

No

Syntenic to Ae. tauschii c

Yes

No

  1. aMost significant BlastN result with 99–100% identity to genomic sequence of barley (http://webblast.ipk-gatersleben.de/barley/)
  2. bBased on high-confidence (HC)-gene mapping of the barley reference sequence [72]
  3. cBased on the Ae. tauschii genome https://doi.org/10.1073/pnas.1219082110