|  |  |  |  | Library size (× 106) |  |  |  | |
---|---|---|---|---|---|---|---|---|---|
Dataset and reference | Replicate size | Species | Type | Number of genes | Min. | Max. | Correlation among replicatesa | Sequencing instrument | Library type |
CRC AZA | {3, 3} | Human | mRNA | 16,499 | 3.3 | 4.2 | (0.99, 0.99) | HiSeq 2000 | PE, 100, poly(A) |
Hammer [39] | {2, 2} | Rat | mRNA | 15,908 | 17.3 | 23.5 | (0.99, 0.99) | GAII | SR, 50, poly(A) |
Bottomly [40] | {10, 11} | Mouse | mRNA | 12,784 | 2.7 | 7.3 | (0.82, 0.99) | GAIIx | SR, 30, poly(A) |
GTEx [41] | {28, 30} | Human | mRNA | 18,632 | 10.2 | 76.8 | (0.45, 0.99) | HiSeq 2000 | PE, 76, poly(A) |
Zhang [36] | {81, 91} | Human | mRNA | 19,254 | 10.8 | 31.7 | (0.29, 0.98) | HiSeq 2000 | PE, 90, poly(A) |
 |  |  | lncRNA | 10,051 | 0.3 | 1.0 | (0.19, 0.97) |  |  |
NGP nutlin | {10, 10} | Human | mRNA | 17,489 | 13.4 | 18.1 | (0.98, 0.99) | NextSeq 500 | PE, 75, poly(A) |
 |  |  | lncRNA | 8929 | 0.2 | 0.4 | (0.83, 0.99) |  |  |