Table 1 Summary of genetic diversity in different pear groups
From: Diversification and independent domestication of Asian and European pears
Pear accessions—groups (number of samples) | Effective site | SNP number | ϴw | ϴπ | Tajima’s D |
|---|---|---|---|---|---|
All (113) | 203,042,855 | 18,302,883 | 1.56E-02 | 5.50E-03 | − 0.81 |
Asian (63) | 232,249,059 | 14,501,253 | 1.20E-02 | 5.24E-03 | − 0.83 |
European (50) | 173,858,920 | 6,945,796 | 8.07E-03 | 3.71E-03 | − 0.86 |
Cultivated (56) | 214,202,044 | 10,902,511 | 1.01E-02 | 5.64E-03 | − 0.72 |
Wild (57) | 188,713,516 | 13,540,936 | 1.42E-02 | 5.15E-03 | − 0.95 |
Cultivated Asian (31) | 243,314,658 | 8,441,743 | 7.76E-03 | 4.76E-03 | − 0.80 |
Wild Asian (32) | 215,884,040 | 10,510,280 | 1.08E-02 | 5.21E-03 | − 0.97 |
Cultivated European (25) | 191,912,058 | 4,220,232 | 5.21E-03 | 3.57E-03 | − 0.78 |
Wild European (25) | 155,765,734 | 4,894,247 | 7.38E-03 | 3.53E-03 | − 1.09 |