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Fig. 4 | Genome Biology

Fig. 4

From: HmmUFOtu: An HMM and phylogenetic placement based ultra-fast taxonomic assignment and OTU picking tool for microbiome amplicon sequencing studies

Fig. 4

Comparison of taxonomic assignment accuracy between HmmUFOtu and uclust, the QIIME-default OTU picking strategy, using the “gg_97_otus_GTR” database. The height of the bars reflects the assignment accuracy of four simulated datasets at different taxonomic levels using HmmUFOtu (a) or QIIME-default method (b, c). a, b Accuracy measured at per-read level. c Accuracy measured at per-OTU level

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Genome Biology

ISSN: 1474-760X

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