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Table 1 Analysis of merge targets on human–mouse mixture datasets

From: dropEst: pipeline for accurate estimation of molecular counts in droplet-based single-cell RNA-seq experiments

Dataset

Merge type

Number of merges

Fraction of mixed merges

Similarity to merge with barcodes

10x

Poisson

8999

0.58%

99.74%

10x

Known barcodes

8985

0.62%

100%

10x

Simple

21,827

32.96%

20.67%

Drop-seq

Poisson

15,186

0.83%

–

Drop-seq

Simple

26,154

8.74%

–