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Fig. 2 | Genome Biology

Fig. 2

From: SINC-seq: correlation of transient gene expressions between nucleus and cytoplasm reflects single-cell physiology

Fig. 2

Landscape of cross-correlation between cytRNA and nucRNA unveiled transcriptional oscillation of cell-cycle genes in nucRNA highly correlated with expression in cytRNA. a Quantile plot of genes sorted in order of the coefficients of cross-correlation. b Gene ontology analysis with positively correlated genes (p < 0.05) in the quantile plot and c negatively correlated genes. d–f Cell-cycle genes in in silico single-cell data, cytRNA, and nucRNA show correlation with in-phase genes (G1 vs. G1 or G2 vs. G2) and negative correlation with out-of-phase genes (G1 vs. G2). List of genes of G1 and G2 phases are provided in Additional file 1: Figure S8. g Transcriptional oscillation of cell-cycle genes in nucRNA cross-correlated with the gene expression in cytRNA

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Genome Biology

ISSN: 1474-760X

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