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Fig. 9 | Genome Biology

Fig. 9

From: Single-cell RNA-seq analysis unveils a prevalent epithelial/mesenchymal hybrid state during mouse organogenesis

Fig. 9

Expression patterns of neuronal cells. a PCA plot showing the neuronal cells sampled from the forebrain and hindbrain. Cells from different clusters are indicated by colors, and their developmental stages are indicated by shapes. Abbreviation information is shown on the bottom. b Violin plots showing the expression of representative markers in each cluster. c Developmental pseudotime of forebrain cells inferred by Monocle2. Clusters are indicated by colors. d Developmental pseudotime of hindbrain cells inferred by Monocle2. Clusters are indicated by colors. e Heatmaps showing the DEGs of each cluster compared with all other clusters. Cells are arranged by the developmental pseudotime from c and d. f Heatmaps showing enrichment of DEGs of each cluster. The color key from gray to brown indicates high to low P values, respectively

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Genome Biology

ISSN: 1474-760X

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