| |
Tandems
|
NLRs
|
NLR-IDs
|
Other NLRs
| |
| |
Total
|
+NLR-ID
|
-NLR-ID
|
MIC1/NLR-ID
|
Total
|
NLR-IDs
|
Other
|
Tandem
|
Single
|
Tandem
|
Single
|
p value (Fisher’s exact)
|
|
A. tauschii
|
13
|
8 (1a)
|
4
|
3
|
738
|
83
|
655
|
10
|
73
|
16
|
639
|
2.24E-04
|
|
B. distachyon
|
22
|
5
|
17
|
4
|
372
|
19
|
353
|
5
|
14
|
39
|
314
|
6.01E-02
|
|
H. vulgare
|
10
|
3
|
7
|
2
|
462
|
27
|
435
|
3
|
24
|
17
|
418
|
1.04E-01
|
|
O. sativa
|
25
|
4
|
21
|
2
|
518
|
19
|
499
|
4
|
15
|
46
|
453
|
1.00E-01
|
|
S. bicolor
|
15
|
3 (1a)
|
11
|
1
|
341
|
24
|
317
|
5
|
19
|
25
|
292
|
4.79E-02
|
|
S. italica
|
11
|
1
|
10
|
1
|
438
|
12
|
426
|
1
|
11
|
21
|
405
|
4.66E-01
|
|
T. aestivum
|
48
|
17
|
31
|
10
|
2596
|
176
|
2420
|
17
|
159
|
79
|
2341
|
1.70E-04
|
|
T. urartu
|
13
|
5
|
8
|
3
|
558
|
43
|
515
|
5
|
38
|
21
|
494
|
4.17E-02
|
|
Z. mays
|
2
|
0
|
2
|
0
|
171
|
12
|
159
|
0
|
12
|
4
|
155
|
1.00E + 00
|
|
All
|
159
|
48
|
111
|
26
|
6194
|
415
|
5779
|
50
|
365
|
268
|
5511
|
1.02E-08
|
| |
Tandems
|
NLRs
|
MIC1-NLRs
|
Other NLRs
| |
| |
Total
|
+MIC1
|
-MIC1
|
MIC1/NLR-ID
|
Total
|
MIC1-NLRs
|
Other
|
Tandem
|
Single
|
Tandem
|
Single
|
p value (Fisher’s exact)
|
|
A. tauschii
|
13
|
4
|
9
|
3
|
738
|
47
|
691
|
4
|
43
|
22
|
669
|
7.66E-02
|
|
B. distachyon
|
22
|
8
|
14
|
4
|
372
|
25
|
347
|
8
|
17
|
36
|
311
|
4.69E-03
|
|
H. vulgare
|
10
|
4
|
6
|
2
|
462
|
36
|
426
|
4
|
32
|
16
|
410
|
6.11E-02
|
|
O. sativa
|
25
|
5
|
20
|
2
|
518
|
17
|
501
|
5
|
12
|
45
|
456
|
1.74E-02
|
|
S. bicolor
|
15
|
2
|
13
|
1
|
341
|
19
|
322
|
2
|
17
|
28
|
294
|
6.78E-01
|
|
S. italica
|
11
|
5
|
6
|
1
|
438
|
13
|
425
|
5
|
8
|
17
|
408
|
1.98E-04
|
|
T. aestivum
|
48
|
16 (1b)
|
31
|
10 (1c)
|
2596
|
166
|
2430
|
17
|
149
|
79
|
2351
|
8.13E-05
|
|
T. urartu
|
13
|
6
|
7
|
3
|
558
|
38
|
520
|
6
|
32
|
20
|
500
|
5.60E-03
|
|
Z. mays
|
2
|
0
|
2
|
0
|
171
|
1
|
170
|
0
|
1
|
4
|
166
|
1.00E + 00
|
|
All
|
159
|
51
|
108
|
26
|
6194
|
362
|
5832
|
52
|
310
|
266
|
5566
|
4.12E-12
|
- Contingency table of discovered NLR tandems (head-to-head gene pairs within 15-kbp distance). Top: tandems involving NLR-IDs; bottom: tandems involving members of MIC1
- MIC1- NLR-ID/NLR tandems generally consist of a MIC1-NLR-ID and a non-MIC1 NLR
- aA. tauschii and S. bicolor have the only NLR-ID/NLR-ID tandems
- bT.aestivum has one intra-MIC1 (outer clade) NLR/NLR tandem
- cT. aestivum has the only NLR/NLR-ID tandem with the NLR (and not the NLR-ID) being a member of MIC1
