Table 1 Number of NLRs and NLR-IDs in MIC1, MIC2, and MIC3 in nine grass species
Fig. 1a tree | Root clade (C13) | Outer clade (C14, C15) | Inner MIC1 (C16) | Outer clade to MIC2 (C23) | Inner MIC2 (C23) | MIC3 (C24) | |||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Species | Total | +IDa | % + ID | Total | Total | +ID | % + ID | Total | +ID | % + ID | Total | +ID | % + ID | Total | Total | +ID | % + ID | Total | +ID | % + ID | Total | +ID | % + ID |
S. italica | 281 | 9 | 2.96 | 13 | 1 | 0 | 0 | 5 | 0 | 0.00 | 7 | 2 | 28.57 | 11 | 10 | 0 | 0.00 | 1 | 0 | 0.00 | 4 | 2 | 50.00 |
S. bicolor | 262 | 22 | 8.40 | 19 | 3 | 0 | 0 | 10 | 0 | 0.00 | 6 | 4 | 66.67 | 11 | 2 | 0 | 0.00 | 9 | 0 | 0.00 | 3 | 3 | 100.00 |
Z.mays | 84 | 7 | 8.33 | 1 | 1 | 0 | 0 | 0 | 0 | 0.00 | 0 | 0 | 0.00 | 2 | 1 | 0 | 0.00 | 1 | 0 | 0.00 | 0 | 0 | 0.00 |
O. sativa | 362 | 18 | 4.97 | 17 | 3 | 0 | 0 | 7 | 0 | 0.00 | 7 | 3 | 42.86 | 8 | 8 | 0 | 0.00 | 0 | 0 | 0.00 | 4 | 2 | 50.00 |
B. distachyon | 255 | 16 | 6.27 | 25 | 3 | 0 | 0 | 10 | 0 | 0.00 | 12 | 7 | 58.33 | 8 | 1 | 0 | 0.00 | 7 | 4 | 57.14 | 4 | 3 | 75.00 |
H. vulgare | 311 | 27 | 8.68 | 36 | 2 | 0 | 0 | 12 | 0 | 0.00 | 22 | 13 | 59.10 | 8 | 4 | 1 | 25.00 | 4 | 1 | 25.00 | 6 | 4 | 66.67 |
A. tauschii (D) | 482 | 67 | 13.90 | 47 | 3 | 0 | 0 | 28 | 4 | 14.29 | 16 | 12 | 75.00 | 20 | 4 | 1 | 25.00 | 16 | 0 | 0.00 | 11 | 9 | 81.82 |
T. aestivum (A, B and D) | 1732 | 133 | 7.68 | 166 | 7 | 0 | 0 | 91 | 13 | 14.29 | 68 | 40 | 58.82 | 62 | 18 | 1 | 5.56 | 44 | 27 | 61.36 | 35 | 12 | 34.29 |
T. aestivum (A only) | 513 | 35 | 6.82 | 61 | 0 | 0 | 0 | 33 | 3 | 9.09 | 28 | 16 | 57.14 | 17 | 6 | 0 | 0.00 | 11 | 6 | 54.55 | 10 | 2 | 20.00 |
T. aestivum (B only) | 619 | 50 | 8.08 | 56 | 4 | 0 | 0 | 33 | 7 | 21.21 | 19 | 11 | 57.89 | 24 | 6 | 0 | 0.00 | 18 | 10 | 55.56 | 8 | 5 | 62.50 |
T. aestivum (D only) | 497 | 34 | 6.84 | 45 | 3 | 0 | 0 | 23 | 2 | 8.70 | 19 | 11 | 57.89 | 12 | 6 | 1 | 16.67 | 6 | 3 | 50.00 | 13 | 4 | 30.77 |
ChrU only | 103 | 14 | 13.59 | 4 | 0 | 0 | 0 | 2 | 1 | 50.00 | 2 | 2 | 100.00 | 9 | 0 | 0 | 0.00 | 9 | 8 | 88.89 | 4 | 1 | 25.00 |
T. urartu (A) | 377 | 32 | 8.49 | 38 | 2 | 0 | 0 | 17 | 6 | 35.29 | 19 | 10 | 52.63 | 4 | 1 | 0 | 0.00 | 3 | 0 | 0.00 | 11 | 2 | 18.18 |
Totalb | 4146 | 331 | 362 | 25 | 0 | 180 | 23 | 157 | 91 | 134 | 49 | 3 | 85 | 32 | 78 | 37 | |||||||
Average | 7.94 | 0.00 | 12.78 | 57.96 | 6.12 | 37.65 | 47.44 | ||||||||||||||||