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Fig. 3 | Genome Biology

Fig. 3

From: Genome-wide analyses reveal a role of Polycomb in promoting hypomethylation of DNA methylation valleys

Fig. 3

Identification of three groups of DMVs. a UCSC Genome Browser snapshots of DNA methylomes, histone modifications, and RNA levels near group I DMVs (Srsf2, Six1), a group II DMV (Gpr85), and a group III DMV (Pax6) in mouse tissues. Regions with dynamic DNA methylation are shaded. b Boxplot showing the correlation coefficients between DNA methylation and gene expression for three groups of DMVs in mouse tissues. c Boxplot showing the CG density for DMVs or tissue-specific differentially methylated regions (tsDMR) within DMVs. d The chromatin state (presence of H3K4me3 and/or H3K27me3) is shown for different groups of DMVs. e Percentages of DMVs with super-enhancers are shown as bar graphs for different groups of DMVs

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Genome Biology

ISSN: 1474-760X

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