Table 1 HLA typing performance on simulated data
From: Kourami: graph-guided assembly for novel human leukocyte antigen allele discovery
| Â | Class I | Class II | ||||
|---|---|---|---|---|---|---|
| Â | A | B | C | DQA1 | DQB1 | DRB1 |
PHLAT (four-digit P) | 0.85 (147/172) | 0.91 (135/149) | 0.95 (122/129) | 0.93 (178/191) | 0.98 (169/173) | 0.99 (195/197) |
HLA*PRG (six-digit G) | 1.00 (174/174) | 0.99 (143/144) | 0.99 (115/116) | 1.00 (197/197) | 1.00 (159/159) | 1.00 (200/200) |
Kourami (type) | 1.00 (199/200) | 1.00 (200/200) | 0.99 (198/200) | 1.00 (200/200) | 1.00 (200/200) | 1.00 (200/200) |
Kourami (sequence) | 0.99 (198/200) | 1.00 (200/200) | 0.98 (195/200) | 1.00 (200/200) | 1.00 (199/200) | 1.00 (200/200) |