Fig. 5
From: Extensive epigenetic reprogramming during the life cycle of Marchantia polymorpha
Characterization of DMCs indicative of epigenetic reprogramming, i.e. DMCs that gained methylation in (a) antherozoids or archegonia compared to vegetative gametophytic tissues (309,834 DMCs), (b) early sporophytes compared to gametangia/gametes (24,073 DMCs), and (c) during sporophyte development (15,549 DMCs). Their distribution across the three sequence contexts (CG, CHG, and CHH) is shown as pie charts on the left. For each sequence context, the number of DMCs associated with a given genomic feature context is shown in a spider graph on the right. TE transposable element, LTR long terminal repeat, LINE long interspersed element, SINE short interspersed element, RC rolling circle transposon, US/DS upstream/downstream gene flanking regions, UTR untranslated region. “Repeats” included satellite, telomeric satellite, rRNA, snRNA, and simple repeats. “Repeats (ukn)” included unknown and unclassified repeats