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Fig. 2 | Genome Biology

Fig. 2

From: MICRA: an automatic pipeline for fast characterization of microbial genomes from high-throughput sequencing data

Fig. 2

CGH array results comparing the P134S strain gene content to BPZE1 gene content. a Obtained log ratios from the CGH array experiment are represented as a MA plot. Genes within the clusters predicted by MICRA to be absent in P134S are indicated in red. Genes known to be absent in BPZE1 are indicated in green. Dashed red line represent log ratio = −1. b QQ plot of t-statistic for P134S strain gene content compared to BPZE1 gene content as determined by CGH array. Quantiles of t-statistics distribution for all ORFs were plotted against a normal standard distribution. Genes highlighted in panel a are marked with red and green stars and appear not normally distributed, indicating a highly divergent log ratio

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Genome Biology

ISSN: 1474-760X

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