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Fig. 5 | Genome Biology

Fig. 5

From: PureCLIP: capturing target-specific protein–RNA interaction footprints from single-nucleotide CLIP-seq data

Fig. 5

Agreement of called sites between replicates. For each eCLIP dataset (a: PUM2, b: RBFOX2, c: U2AF2), we report for each given number of called sites x in replicate 1 (corresponding to a certain p value or score threshold), the percentage that were also called within the top x ranking sites in replicate 2 after correcting for different biases (see “Results” and “Methods”). The leftmost point of each curve corresponds to the number of calls associated with the lowest p value or highest score the strategy can report. rep1 replicate 1

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