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Fig. 3 | Genome Biology

Fig. 3

From: PureCLIP: capturing target-specific protein–RNA interaction footprints from single-nucleotide CLIP-seq data

Fig. 3

Accuracy in detecting bona fide binding regions (depicted by gray areas). Left panel: a Distribution of the distances of the top 1000 sites called by each method to the closest PUM2 motif start position. b Same as (a), but for RBFOX2 motif start positions. c, d Distribution of the distances of the top 5000 sites called by each method with respect to 3 splice sites. Right panel: Precision of the called sites for all methods at different sensitivity settings, i.e., using different p value or score thresholds. The leftmost point of each curve corresponds to the number of calls within the bona fide binding region associated with the lowest p value or highest score the strategy can report

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