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Table 2 Genetic features of TSP sites

From: Long-term balancing selection contributes to adaptation in Arabidopsis and its relatives

Orthologous gene (A. th) Site label Position in A. th r 2 (A. th/C. ru) πa (A. th/C. ru) MAF (A. th/C. ru)
AT1G35220 TSP-1 Chr 1: 12913634 1/1 0.036 (<2.2E-16)/0.037(<2.2E-16) 0.432/0.217
TSP-2 Chr 1: 12913648 0.432/0.217
AT2G16570 TSP-3 Chr 2: 7180661 0.92/1 0.017 (2.9E-9)/0.019 (5.9E-10) 0.198/0.261
TSP-4 Chr 2: 7180598 0.185/0.261
AT4G29360 TSP-5 Chr 4: 14452628 1/1 0.009 (1.8E-4)/0.034 (<2.2E-16) 0.062/0.434
TSP-6 Chr 4: 14452661 0.062/0.434
AT5G38460 TSP-7 Chr 5: 15399653 0.55/0.86 0.007 (0.34)/0.031 (6.4E-3) 0.099/0.261
TSP-8 Chr 5: 15399591 0.086/0.391
AT5G44000 TSP-9 Chr 5: 17702574 1/1 0.010 (1.4E-10)/0.023 (<2.2E-16) 0.074/0.174
TSP-10 Chr 5: 17702547 0.074/0.174
  1. aValues are the averages of the corresponding values in all 100 bp windows covering the TSP sites in strong linkage disequilibrium that could yield an allelic tree, and their associated FDR-adjusted P values are listed in parentheses