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Table 1 GO enrichment tests of RNA co-expression modules containing multiple eRD genes for the DTA trait

From: Substantial contribution of genetic variation in the expression of transcription factors to phenotypic variation revealed by eRD-GWAS

Module name

GO term enrichment of module

Number of eRD genes within module (percentage of eRD genes in module)

Log2 odds ratio for eRD genes in module

Thistle3

Metal ion transport; transferring phosphorus-containing groups; ATP binding

20 (54.1%)

9.17**

Navajowhite2

NAD(P) metabolic

18 (34.6%)

8.03**

Firebrick4

Nitrate transport; magnesium ion binding

15 (35.7%)

8.38**

Palevioletred3

Terpene synthase; regulation of transcription; response to nitrate

6 (11.1%)

6.33**

Honeydew

Cell wall organization; maintenance of floral meristem

4 (11.1%)

6.92**

  1. ** P value of enrichment test < 0.01