Fig. 1
From: Extensive transcriptomic and epigenomic remodelling occurs during Arabidopsis thaliana germination
Overview of the extensive transcriptomic and epigenetic remodelling that occurs during seed germination. a (i) The time course examined in this study. Transcriptomes and sRNAs were analysed at all time points. H denotes freshly harvested seeds, collected before two weeks of dry, dark ripening. DNA methylation was analysed at 0 h (after ripening), 48 h S, 6 h SL, 24 h SL and 48 h SL. (ii) The number of differentially methylated regions (DMRs), sRNAs and genes that were identified and differentially expressed (DE) over germination are shown (as total numbers for all time points combined/compared). b An example of an unannotated DE locus (XLOC_000109), with nearby differential methylation and overlapping sRNAs, as shown in the AnnoJ genome browser