Fig. 4
From: Comprehensive benchmarking and ensemble approaches for metagenomic classifiers
The (a) precision and (b) recall for intersections of pairs of tools at the species level, sorted by decreasing mean precision. A comparison between multi-tool strategies and combinations at the (c) genus and (d) species levels. The top unique (non-overlapping) pairs of tools by F1 score from (a, b) are benchmarked against the top single tools at the species level by F1 score, ensemble classifiers that take the consensus of four or five tools (see “Methods”), and a community predictor that incorporates the results from all 11 tools in the analysis to improve AUPR