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Fig. 1 | Genome Biology

Fig. 1

From: Identification of high-confidence RNA regulatory elements by combinatorial classification of RNA–protein binding sites

Fig. 1

CLIP-seq data for different RBPs, CLIP technologies, and peak calling methods. a We show the numbers (log scale) of binding peaks defined by different peak calling methods for example RBPs. b CLIP-seq signals of an example RBP, CPSF6, binding on a gene, NAPB. The binding peaks are defined by Piranha (from signal height) and PARalyzer (from T to C mutation), respectively. c, d Examples of co-binding sites and binding peaks of single RBP. We show the raw reads and peaks identified by Piranha (red bar)

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Genome Biology

ISSN: 1474-760X

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