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Fig. 3 | Genome Biology

Fig. 3

From: A tandem simulation framework for predicting mapping quality

Fig. 3

Stages of the Qtip pipeline. Computational steps and intermediate results in Qtip. Numbers denote ordering of steps and arrows denote the flow of data. The input (upper left) is a collection of sequencing reads and the ultimate output (upper right) is a SAM file containing alignments, where each aligned read’s MAPQ field is set according to Qtip’s prediction

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