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Fig. 5 | Genome Biology

Fig. 5

From: Population and allelic variation of A-to-I RNA editing in human transcriptomes

Fig. 5

RNA editing of MDM4 is genetically associated with cancer and cognitive performance. a Box plot showing the significant association of SNP rs12038102 with editing level (Φ) at chr1:204525548 within the TSI population. Each dot represents data from a particular individual and the size of each dot indicates the number of reads covering the RNA editing site in that individual. b ASED allele-specific editing level (Φ) of chr1:204526727 with respect to SNP rs1046874 within the TSI population. Error bars represent likelihood-ratio test-based 95% confidence intervals of RNA editing levels inferred from read counts. Average allelic Φ values are represented in parentheses. c LD plot showing GWAS signals (breast cancer, prostate cancer, and cognitive performance; green) linked with edQTL (purple) and ASED (orange) SNPs in MDM4

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