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Fig. 3 | Genome Biology

Fig. 3

From: Dynamic DNA methylation reconfiguration during seed development and germination

Fig. 3

RdDM-dependent and CMT2-dependent hypermethylation of transposons occur during seed development. ac Boxplots showing methylation levels within TEs in embryo (Col-0) at mid-torpedo to early-maturation stage, in dry seeds of WT (Col-0), ddc, ddcc, and rdd, and in leaf (Col-0): (a) mCG, (b) mCHG, (c) mCHH. d A browser snapshot of CHH methylation levels within TEs. Some TEs lost CHH methylation both in ddc and ddcc, and others did only in ddcc. e, f CHH methylation patterns across RdDM-targeted TE and CMT2-targeted TE, respectively. Embryo and leaf methylome data are obtained from [22] and [48], respectively

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