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Fig. 2 | Genome Biology

Fig. 2

From: Epigenomic and functional analyses reveal roles of epialleles in the loss of photoperiod sensitivity during domestication of allotetraploid cottons

Fig. 2

Asymmetrical distribution of TE and DNA methylation in A and D genomes. a Distribution of class I and II TEs in genic regions of G. arboreum (Ga, blue for I and gray for II) and G. raimondii (Gr, orange for I and yellow for II). b Density differences (between G. raimondii and G. arboreum) of Gypsy (orange), Copia (blue), TRIM (terminal repeat retrotransposons in miniature, green), and other long terminal repeats (LTR, gray) in the genic regions. c, d CG (c) and CHG (d) methylation levels in the genic regions of G. arboreum and G. raimondii. e Average CG methylation differences between intergenic and intragenic TEs. f Average CHG methylation differences between intergenic and intragenic TEs

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Genome Biology

ISSN: 1474-760X

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