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Table 1 Location of genes flanking the FOXO1 locus in human Chr13 across species

From: Regulatory landscape fusion in rhabdomyosarcoma through interactions between the PAX3 promoter and FOXO1 regulatory elements

 

LHFP

COG6

FOXO1

MRPS31

 

Homo sapiens

Chr 13

Chr 13

Chr 13

Chr 13

Human

Macaca mulatta

Chr 17

Chr 17

Chr 17

Chr 17

Macaque

Callithrix jacchus

Chr 5

Chr 5

Chr 5

Chr 5

Marmoset

Canis lupus familiaris

Chr 25

Chr 25

Chr 25

Chr 25

Dog

Monodelphis domestica

Chr 4

Chr 4

Chr 4

Chr 4

Opossum

Mus musculus

Chr 3

Chr 3

Chr 3

Chr 8

Mouse

Rattus norvegicus

Chr 2

Chr 2

Chr 2

Chr 16

Rat

Gallus gallus

Chr 1

Chr 1

Chr 1

Chr 1

Chicken

Alligator mississippiensis

JH731763

JH731763

JH731763

JH731763

American alligator

Xenopus tropicalis

GL172869

GL172869

GL172869

GL172869

Clawed frog

Latimeria chalumnae

JH129255

JH129255

JH127414

JH127414

Coalecanth

Danio rerio

Chr 10/15

Chr 15

Chr 10/15

Chr 5

Zebrafish

Oryzias latipes

Chr 13

Chr 13

Chr 13/14

Chr 14

Medaka

Gasterosteus aculeatus

Group I

Group I

Group I/VII

Group VII

Stickleback

Callorhinchus milli

KI635872

KI635872

KI635872

KI635872

Elephant shark

  1. Gene names are on the top row, animal species on the left column, common names on the right column. In bold, genes mapping to a different syntenic region. The Coelacanth (L. chalumnae) genome is fractioned at present and thus it is not possible to ascertain if the LHFP/COG6 and FOXO1/MRPS31 scaffolds are contiguous